PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.H01007.1.p
Common NameEUGRSUZ_H01007, LOC104456678
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 290aa    MW: 32321.4 Da    PI: 4.4399
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.H01007.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY941.1e-2954112259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d +v+++tY+++Hnh+
  Eucgr.H01007.1.p  54 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCKTDASVLVVTYTSTHNHP 112
                       699***********************9988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-3143114IPR003657WRKY domain
SuperFamilySSF1182908.37E-2649114IPR003657WRKY domain
SMARTSM007741.0E-3453113IPR003657WRKY domain
PROSITE profilePS5081130.77954114IPR003657WRKY domain
PfamPF031067.1E-2555112IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MAADSIAPKL DMDDPEGAKP EGQASKRRKL VHKTVVRVKI EANVVKQKNE GPPSDFWSWR  60
KYGQKPIKGS PYPRGYYRCS TSKGCSAKKQ VERCKTDASV LVVTYTSTHN HPGPDIHSLN  120
PTVQPSEADD DPEETAVAVA VSPAVSAQEE VPEQDQDQED QDQEQHLDLG DKQDRDRHTH  180
VAIDEADRAR EDNFHYLRSP TNCSSQDLVM EQDDTLAPQL QVYEEPLVSC SREDPSGVGA  240
APVPPEPEPE PEEGHDFFDE LEELPVFSYF ANLNRINHFI DDRIPVVPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-16541141574WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.H01007.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010069834.10.0PREDICTED: probable WRKY transcription factor 68
SwissprotO046091e-34WRK22_ARATH; WRKY transcription factor 22
TrEMBLA0A059AY080.0A0A059AY08_EUCGR; Uncharacterized protein
STRINGPOPTR_0014s11490.13e-77(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM153711117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.18e-35WRKY DNA-binding protein 35